Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX9 ENSBTAG00000006323

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Description

sorting nexin 9 [Source:VGNC Symbol;Acc:VGNC:35115]

Location

Primary_assembly 9: 94,425,163-94,514,720 forward strand.

ARS-UCD1.3:CM008176.2

About this gene

This gene has 4 transcripts (splice variants), 251 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000008296.7	SNX9-201	3504	624aa	ENSBTAP00000008296.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N6W6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000066150.3	SNX9-203	3588	593aa	ENSBTAP00000054847.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MZ54	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000075350.2	SNX9-202	3101	497aa	ENSBTAP00000070723.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NG34	-
ENSBTAT00000067628.2	SNX9-204	1830	609aa	ENSBTAP00000064173.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUG5	-

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Summary

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