Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NEDD9 ENSBTAG00000006287

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Description

neural cell expressed, developmentally down-regulated 9 [Source:VGNC Symbol;Acc:VGNC:31984]

Location

Primary_assembly 23: 45,010,332-45,131,898 forward strand.

ARS-UCD1.3:CM008190.2

About this gene

This gene has 5 transcripts (splice variants), 208 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070697.2	NEDD9-201	4640	827aa	ENSBTAP00000065635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N5T1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000063698.3	NEDD9-202	4528	827aa	ENSBTAP00000055362.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N0J9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000121049.1	NEDD9-205	4044	675aa	ENSBTAP00000093967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000080908.2	NEDD9-203	4015	678aa	ENSBTAP00000072078.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MD70	-
ENSBTAT00000025973.7	NEDD9-204	3753	416aa	ENSBTAP00000025973.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QPB6	-

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Summary

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