Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX5 ENSBTAG00000003422

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Description

sorting nexin 5 [Source:VGNC Symbol;Acc:VGNC:111263]

Location

Primary_assembly 13: 38,215,110-38,239,985 reverse strand.

ARS-UCD1.3:CM008180.2

About this gene

This gene has 3 transcripts (splice variants), 244 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000039411.5	SNX5-201	2032	410aa	ENSBTAP00000039205.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3ZBM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000109001.1	SNX5-202	1984	369aa	ENSBTAP00000078512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000079751.2	SNX5-203	1164	387aa	ENSBTAP00000074167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MR47	-

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Summary

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