Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Gene tree
  - Orthologues
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Ontologies
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Gene: HRC ENSBTAG00000002853

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Description

histidine rich calcium binding protein [Source:VGNC Symbol;Acc:VGNC:29952]

Location

Primary_assembly 18: 55,652,308-55,657,876 reverse strand.

ARS-UCD1.3:CM008185.2

About this gene

This gene has 5 transcripts (splice variants) and 88 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073105.2	HRC-201	3107	905aa	ENSBTAP00000064344.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N3Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000125642.1	HRC-202	3158	873aa	ENSBTAP00000091851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000043065.4	HRC-203	2976	904aa	ENSBTAP00000040660.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQD7	-
ENSBTAT00000105239.1	HRC-204	2861	820aa	ENSBTAP00000090509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000074003.2	HRC-205	2769	874aa	ENSBTAP00000066128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBQ8	-

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Summary

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