Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARVCF ENSBTAG00000001473

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Description

ARVCF delta catenin family member [Source:VGNC Symbol;Acc:VGNC:49535]

Location

Primary_assembly 17: 72,915,660-72,946,265 reverse strand.

ARS-UCD1.3:CM008184.2

About this gene

This gene has 4 transcripts (splice variants), 269 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070594.2	ARVCF-204	3095	972aa	ENSBTAP00000062081.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPQ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000061101.4	ARVCF-203	3616	924aa	ENSBTAP00000053343.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPV1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000001929.6	ARVCF-201	3411	867aa	ENSBTAP00000001929.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QX40	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000082497.2	ARVCF-202	3357	849aa	ENSBTAP00000069715.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NDV7	-

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Summary

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