Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: afdna ENSAMXG00000017862

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Description

afadin, adherens junction formation factor a [Source:ZFIN;Acc:ZDB-GENE-050419-52]

Location

Primary_assembly 3: 55,011,533-55,153,955 forward strand.

Astyanax_mexicanus-2.0:CM008302.1

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000018401.2	afdna-201	6052	1939aa	ENSAMXP00000018401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5LEY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000051828.1	afdna-202	6052	1939aa	ENSAMXP00000039634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5LEY9	-
ENSAMXT00000049047.1	afdna-203	6007	1924aa	ENSAMXP00000031590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1IQ43	-
ENSAMXT00000033057.1	afdna-204	5986	1917aa	ENSAMXP00000046562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JVV9	-
ENSAMXT00000036043.1	afdna-205	4791	1596aa	ENSAMXP00000052874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1KGN6	-

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Summary

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