Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: vps39 ENSAMXG00000008277

.

Description

VPS39 subunit of HOPS complex [Source:NCBI gene;Acc:103044853]

Location

Primary_assembly 9: 21,928,171-21,949,447 forward strand.

Astyanax_mexicanus-2.0:CM008308.1

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000055547.1	vps39-201	5219	875aa	ENSAMXP00000048859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1K5G0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000008505.2	vps39-202	2613	870aa	ENSAMXP00000008505.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5KLP3	-

.

Summary

.

.