Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL18A1 ENSCAFG00845022231

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Description

collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]

Location

Primary_assembly 31: 38,519,589-38,593,442 forward strand.

ROS_Cfam_1.0:CM025130.1

About this gene

This gene has 5 transcripts (splice variants), 179 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00845040900.1	COL18A1-205	5781	1717aa	ENSCAFP00845032029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PHE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00845039233.1	COL18A1-201	4407	1354aa	ENSCAFP00845030728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3S2Z1	-
ENSCAFT00845039642.1	COL18A1-202	4293	1316aa	ENSCAFP00845031055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3S342	-
ENSCAFT00845040018.1	COL18A1-203	4290	1315aa	ENSCAFP00845031337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PKV4	-
ENSCAFT00845040386.1	COL18A1-204	4230	1295aa	ENSCAFP00845031623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PQI3	-

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Summary

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