Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL9A1 ENSCAFG00845008634

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Description

collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]

Location

Primary_assembly 12: 33,303,461-33,386,418 reverse strand.

ROS_Cfam_1.0:CM025111.1

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00845015424.1	COL9A1-201	2995	921aa	ENSCAFP00845011981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0RYK6 A0A8I3NL86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00845015554.1	COL9A1-202	2380	680aa	ENSCAFP00845012085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0RYB6 A0A8I3N625	-
ENSCAFT00845015622.1	COL9A1-203	987	328aa	ENSCAFP00845012143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0P8R6 A0A8I3N718	-

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Summary

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