Transcript: ENSSSCT00000066100.1 COL6A3-208

Description

collagen type VI alpha 3 chain [Source:VGNC Symbol;Acc:VGNC:95982]

Location

Primary_assembly 15: 137,011,433-137,103,304 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 72 domains and features, is associated with 4282 variant alleles and maps to 15 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000027331.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050631.3	COL6A3-207	8932	2901aa	ENSSSCP00000035489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZVG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000049596.3	COL6A3-203	7281	2348aa	ENSSSCP00000050165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B163	-
ENSSSCT00000066100.1	COL6A3-208	7163	2060aa	ENSSSCP00000058388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPF4	-
ENSSSCT00000081117.1	COL6A3-201	7007	2334aa	ENSSSCP00000073381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8G7	-
ENSSSCT00000057728.3	COL6A3-204	6927	2142aa	ENSSSCP00000033457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPQ1	-
ENSSSCT00000039840.3	COL6A3-202	5703	1771aa	ENSSSCP00000032535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZLV2	-
ENSSSCT00000047656.3	COL6A3-205	5259	1742aa	ENSSSCP00000056925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BL81	-
ENSSSCT00000059316.3	COL6A3-206	5077	1673aa	ENSSSCP00000057413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLM4	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 7,163 bps, Translation length: 2,060 residues

Version

ENSSSCT00000066100.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSSSCT00000066100.1 COL6A3-208

Summary

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Transcript: ENSSSCT00000066100.1 COL6A3-208

Summary

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