Primary_assembly 1: 169,777,610-169,868,068 forward strand.
This transcript has 28 exons, is annotated with 35 domains and features, is associated with 1558 variant alleles and maps to 16 oligo probes.
This transcript is a product of gene ENSSSCG00000004983.5 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
---|---|---|---|---|---|---|---|
ENSSSCT00000065104.2 | - | 4824 | 1410aa | ENSSSCP00000039435.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A6D5 A0A8D0VV83 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
ENSSSCT00000005502.4 | - | 5379 | 788aa | ENSSSCP00000005365.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1SIP9 | - |
ENSSSCT00000030475.4 | - | 5301 | 771aa | ENSSSCP00000027225.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3LSY2 | - |
ENSSSCT00000005496.5 | - | 4867 | 1401aa | ENSSSCP00000005359.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1KJI9 F1SIR4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
ENSSSCT00000065451.3 | - | 4864 | 1400aa | ENSSSCP00000048731.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AXQ5 A0A4X1SSM4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
ENSSSCT00000051414.1 | - | 4441 | 1358aa | ENSSSCP00000034005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1SU61 A0A8D1PDX5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
ENSSSCT00000083148.1 | - | 4426 | 1353aa | ENSSSCP00000062835.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1SU76 A0A5G2QF61 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |