Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSAMP ENSSSCG00000027941

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Description

limbic system associated membrane protein [Source:VGNC Symbol;Acc:VGNC:89868]

Location

Primary_assembly 13: 143,675,575-144,304,151 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000030211.4	LSAMP-205	4791	361aa	ENSSSCP00000022632.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LEZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000086666.2	LSAMP-203	2007	306aa	ENSSSCP00000068567.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R2Z2 A0A8D0JY48	-
ENSSSCT00000067328.2	LSAMP-204	1681	291aa	ENSSSCP00000070844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R9N8	-
ENSSSCT00000043882.3	LSAMP-201	1027	313aa	ENSSSCP00000055031.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BG58 A0A8D0V339	-
ENSSSCT00000057528.3	LSAMP-202	978	325aa	ENSSSCP00000056516.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BIT6	-

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Summary

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