Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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ID History
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Gene: SON ENSSSCG00000023674

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Description

SON DNA and RNA binding protein [Source:VGNC Symbol;Acc:VGNC:93336]

Location

Primary_assembly 13: 197,162,116-197,194,078 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 5 transcripts (splice variants) and 218 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000068477.2	SON-204	9015	2457aa	ENSSSCP00000073557.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RFH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000065483.2	SON-205	8985	2447aa	ENSSSCP00000056796.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BK71	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000063351.3	SON-201	7835	2088aa	ENSSSCP00000042846.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AG18	-
ENSSSCT00000026483.4	SON-202	7500	2301aa	ENSSSCP00000020641.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L9C9	-
ENSSSCT00000075153.2	SON-203	1408	455aa	ENSSSCP00000068949.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R430	-

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Summary

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