Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTNNA1 ENSSSCG00000014339

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Description

catenin alpha 1 [Source:VGNC Symbol;Acc:VGNC:87063]

Location

Primary_assembly 2: 140,682,371-140,871,334 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 9 transcripts (splice variants), 218 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000015666.4	CTNNA1-204	5600	1090aa	ENSSSCP00000015253.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RGJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000086785.1	CTNNA1-208	3996	906aa	ENSSSCP00000066731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7Z4 A0A8D1G1G9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000060628.2	CTNNA1-205	3783	989aa	ENSSSCP00000043961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AJ96	-
ENSSSCT00000070792.2	CTNNA1-207	3330	955aa	ENSSSCP00000065766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QLP3	-
ENSSSCT00000082781.2	CTNNA1-209	3252	929aa	ENSSSCP00000066455.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QP27	-
ENSSSCT00000101631.1	CTNNA1-206	3048	861aa	ENSSSCP00000075994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F9C3	-
ENSSSCT00000105626.1	CTNNA1-201	2187	523aa	ENSSSCP00000079947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FL64	-
ENSSSCT00000086119.2	CTNNA1-202	2175	519aa	ENSSSCP00000070643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0K8 A0A8D0SUN5	-
ENSSSCT00000070123.2	CTNNA1-203	1746	581aa	ENSSSCP00000066449.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWY5	-

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Summary

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