Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLK4 ENSSSCG00000014028

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Description

CDC like kinase 4 [Source:VGNC Symbol;Acc:VGNC:86768]

Location

Primary_assembly 2: 79,693,669-79,753,712 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 623 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000104207.1	CLK4-204	2044	484aa	ENSSSCP00000074690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480MVP3 A0A4X1VR53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000039001.3	CLK4-201	2787	481aa	ENSSSCP00000053945.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BBN5 A0A4X1VVL0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000099421.1	CLK4-203	2316	482aa	ENSSSCP00000076192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480XJK5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000015323.4	CLK4-202	1978	445aa	ENSSSCP00000014915.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1EP36 F1S424	-

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Summary

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