Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: POMT1 ENSSSCG00000005716

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Description

protein O-mannosyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:103155]

Location

Primary_assembly 1: 271,432,210-271,452,461 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 6 transcripts (splice variants), 200 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043029.3	POMT1-202	3087	737aa	ENSSSCP00000056986.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BKQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000106138.1	POMT1-204	6483	573aa	ENSSSCP00000079781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FJZ3	-
ENSSSCT00000104533.1	POMT1-205	6369	535aa	ENSSSCP00000079154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FIJ7	-
ENSSSCT00000006286.5	POMT1-206	5203	695aa	ENSSSCP00000006124.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S0W3	-
ENSSSCT00000099711.1	POMT1-203	2862	662aa	ENSSSCP00000075421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F9B7	-
ENSSSCT00000099245.1	POMT1-201	2776	721aa	ENSSSCP00000080637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FNZ1	-

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Summary

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