Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CLCN6 ENSSSCG00000003429

.

Description

chloride voltage-gated channel 6 [Source:VGNC Symbol;Acc:VGNC:86729]

Location

Primary_assembly 6: 71,881,972-71,916,029 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 2 transcripts (splice variants), 212 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000003807.5	CLCN6-201	5654	869aa	ENSSSCP00000003720.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RF80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000081131.2	CLCN6-202	5588	847aa	ENSSSCP00000071349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R2M7	-

.

Summary

.

.