YLP motif containing 1 [Source:VGNC Symbol;Acc:VGNC:95034]
Primary_assembly 7: 97,976,144-98,042,230 forward strand.
Sscrofa11.1:CM000818.5
This gene has 5 transcripts (splice variants) and 204 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000002636.5 | YLPM1-203 | 7054 | 2149aa | ENSSSCP00000002569.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1TB76 F1S2T2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000098940.1 | YLPM1-201 | 7335 | 2054aa | ENSSSCP00000079873.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0QFJ7 A0A8W4FLU9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000043168.3 | YLPM1-204 | 7027 | 2140aa | ENSSSCP00000037702.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A1S0 A0A8D1T5N8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000065687.3 | YLPM1-205 | 6961 | 2118aa | ENSSSCP00000048843.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AXH5 A0A4X1TD19 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000027433.4 | YLPM1-202 | 4916 | 1444aa | ENSSSCP00000019331.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1TB80 I3L5N2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
