Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VEGFA ENSSSCG00000001695

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Description

vascular endothelial growth factor A [Source:VGNC Symbol;Acc:VGNC:94815]

Location

Primary_assembly 7: 38,746,052-38,761,366 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants), 253 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064013.3	VEGFA-202	1947	394aa	ENSSSCP00000054926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BFL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000074202.2	VEGFA-205	2464	316aa	ENSSSCP00000063371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V7P8 A0A5G2QHM5	-
ENSSSCT00000073564.2	VEGFA-204	2071	326aa	ENSSSCP00000072498.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R854	-
ENSSSCT00000001892.4	VEGFA-203	1875	370aa	ENSSSCP00000001845.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9F342	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000068911.1	VEGFA-201	555	184aa	ENSSSCP00000068842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R3S0 A0A8D1IL81	-

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Summary

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