Gene: Trappc13 ENSRNOG00000012124

Description

trafficking protein particle complex subunit 13 [Source:RGD Symbol;Acc:1306583]

Gene Synonyms

LOC294709, RGD1306583

Location

Primary_assembly 2: 35,269,183-35,302,048 reverse strand.

mRatBN7.2:CM026975.1

About this gene

This gene has 4 transcripts (splice variants), 211 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110804.1	Trappc13-204	2975	418aa	ENSRNOP00000077296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5M887	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000105393.1	Trappc13-203	2975	418aa	ENSRNOP00000093885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AXP4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000105092.1	Trappc13-202	2717	418aa	ENSRNOP00000092702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AE67	-
ENSRNOT00000016439.8	Trappc13-201	1691	411aa	ENSRNOP00000016439.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UIY5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,