Gene: Ap1s2 ENSRNOG00000038686

Description

adaptor related protein complex 1 subunit sigma 2 [Source:RGD Symbol;Acc:1561862]

Gene Synonyms

LOC302671, RGD1561862

Location

Primary_assembly X: 30,572,751-30,597,262 reverse strand.

mRatBN7.2:CM026994.1

About this gene

This gene has 4 transcripts (splice variants), 173 orthologues, 7 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097825.1	Ap1s2-203	3456	160aa	ENSRNOP00000086354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5U3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000065075.4	Ap1s2-201	2272	157aa	ENSRNOP00000063764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GV08	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000081652.2	Ap1s2-202	1896	156aa	ENSRNOP00000070442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXX9	-
ENSRNOT00000113986.1	Ap1s2-204	1810	160aa	ENSRNOP00000082726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVG9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,