Summary
- Splice variants
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Gene: Acly ENSRNOG00000016924

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Description

ATP citrate lyase [Source:RGD Symbol;Acc:2018]

Gene Synonyms

ACL, Clatp, MGC124629

Location

Primary_assembly 10: 85,412,049-85,463,320 reverse strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 5 transcripts (splice variants), 280 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000023447.7	Acly-201	4354	1101aa	ENSRNOP00000023447.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V888	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000043172.5	Acly-202	4334	1091aa	ENSRNOP00000046597.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V9G4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000114571.1	Acly-204	4306	1085aa	ENSRNOP00000093648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM81	-
ENSRNOT00000077579.2	Acly-203	4249	1070aa	ENSRNOP00000073397.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K5E7	-
ENSRNOT00000119580.1	Acly-205	1625	491aa	ENSRNOP00000084652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAT1	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data