Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: smarca1 ENSPNAG00000007170

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]

Location

Primary_assembly 23: 31,255,745-31,296,082 reverse strand.

fPygNat1.pri:CM026743.1

About this gene

This gene has 10 transcripts (splice variants), 165 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPNAT00000057988.1	smarca1-210	3489	1162aa	ENSPNAP00000070481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPNAT00000048036.1	smarca1-201	4181	1017aa	ENSPNAP00000075567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000043434.1	smarca1-204	4117	1038aa	ENSPNAP00000067911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000003323.2	smarca1-203	4039	1012aa	ENSPNAP00000006572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4C3U8	-
ENSPNAT00000080753.1	smarca1-202	4030	1009aa	ENSPNAP00000051193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000051232.1	smarca1-206	3932	990aa	ENSPNAP00000042499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000078416.1	smarca1-205	3697	898aa	ENSPNAP00000070037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000003394.2	smarca1-207	3135	1044aa	ENSPNAP00000006535.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4C612	-
ENSPNAT00000003356.2	smarca1-208	2757	918aa	ENSPNAP00000027139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4DVY7	-
ENSPNAT00000003147.2	smarca1-209	2580	859aa	ENSPNAP00000027235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4DUV7	-

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Summary

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