Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHH ENSPTRG00000019912

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Description

sonic hedgehog signaling molecule [Source:VGNC Symbol;Acc:VGNC:53279]

Location

Chromosome 7: 159,969,936-159,981,807 reverse strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 2 transcripts (splice variants), 258 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000109799.1	SHH-202	2791	465aa	ENSPTRP00000075730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SFH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000036890.4	SHH-201	381	126aa	ENSPTRP00000034099.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WZD1 H2QVN8	-

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Summary

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