Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SETD1B ENSPTRG00000005567

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Description

SET domain containing 1B, histone lysine methyltransferase [Source:VGNC Symbol;Acc:VGNC:5580]

Location

Chromosome 12: 125,185,544-125,215,582 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 2 transcripts (splice variants), 226 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000089535.1	SETD1B-201	8663	1962aa	ENSPTRP00000061948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000010219.6	SETD1B-202	5760	1919aa	ENSPTRP00000009452.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q734	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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