sorbin and SH3 domain containing 1 [Source:VGNC Symbol;Acc:VGNC:12506]
Chromosome 10: 96,596,577-96,725,930 reverse strand.
Pan_tro_3.0:CM000324.3
This gene has 8 transcripts (splice variants), 199 orthologues and 14 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000080666.1 | SORBS1-206 | 3885 | 1294aa | ENSPTRP00000087588.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TEA9 A0A6D2XXD2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000005259.5 | SORBS1-201 | 7165 | 1292aa | ENSPTRP00000004863.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8PDY8 A0A6D2W0H4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000109584.1 | SORBS1-202 | 7087 | 1266aa | ENSPTRP00000075887.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SFT7 A0A6D2XW79 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000094849.1 | SORBS1-203 | 6301 | 1004aa | ENSPTRP00000076137.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SI18 A0A6D2XUH9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000105421.1 | SORBS1-204 | 5737 | 816aa | ENSPTRP00000077369.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SK60 A0A6D2VUM7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000082709.1 | SORBS1-205 | 3885 | 1294aa | ENSPTRP00000061582.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RAC2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000077265.1 | SORBS1-207 | 3456 | 1151aa | ENSPTRP00000065027.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8PDY7 A0A6D2WPI4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000087780.1 | SORBS1-208 | 2718 | 905aa | ENSPTRP00000086561.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TBD5 A0A6D2VYY6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
