Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF2 ENSPTRG00000002291

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Description

UPF2 regulator of nonsense mediated mRNA decay [Source:VGNC Symbol;Acc:VGNC:14871]

Location

Chromosome 10: 12,201,908-12,324,946 reverse strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 2 transcripts (splice variants) and 216 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000004195.3	UPF2-201	5364	1272aa	ENSPTRP00000003873.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WN34 H2Q1L9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000097841.1	UPF2-202	3789	1262aa	ENSPTRP00000088479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3THW8	-

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Summary

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