Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CIITA ENSOCUG00000006208

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Description

class II major histocompatibility complex transactivator [Source:HGNC Symbol;Acc:HGNC:7067]

Location

Chromosome 6: 4,507,723-4,550,956 forward strand.

OryCun2.0:CM000795.1

About this gene

This gene has 6 transcripts (splice variants), 140 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000059387.1	CIITA-201	3546	1175aa	ENSOCUP00000029574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000006211.4	CIITA-203	5602	1129aa	ENSOCUP00000005379.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1SQJ8	-
ENSOCUT00000044134.1	CIITA-204	5515	1100aa	ENSOCUP00000030311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000064175.1	CIITA-202	3780	1123aa	ENSOCUP00000031429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000058079.1	CIITA-205	3249	1076aa	ENSOCUP00000042623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000054738.1	CIITA-206	1056	351aa	ENSOCUP00000040309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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