Transcript: ENSMUST00000109050.3 Gm4631-201

Description

predicted gene 4631 [Source:MGI Symbol;Acc:MGI:3782813]

Location

Chromosome 2: 175,166,536-175,169,391 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 86 domains and features and maps to 965 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000078899.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000121393.9	Gm4631-202	4402	498aa	ENSMUSP00000113670.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ART4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000109050.3	Gm4631-201	1494	497aa	ENSMUSP00000104678.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F7CEW8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,494 bps, Translation length: 497 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000109050.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000109050.3 Gm4631-201

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Transcript: ENSMUST00000109050.3 Gm4631-201

Summary

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