Transcript: ENSMUST00000238198.2 Slc30a10-202

Description

solute carrier family 30, member 10 [Source:MGI Symbol;Acc:MGI:2685058]

Gene Synonyms

E130106K10Rik

Location

Chromosome 1: 185,187,045-185,197,957 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1370 variant alleles and maps to 212 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000026614.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000061093.7	Slc30a10-201	5836	470aa	ENSMUSP00000053181.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15599	Q3UVU3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238677.2	Slc30a10-203	5684	215aa	ENSMUSP00000158739.2	Nonsense mediated decay		A0A571BG90	-
ENSMUST00000238198.2	Slc30a10-202	3506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,506 bps,

Version

ENSMUST00000238198.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000238198.2 Slc30a10-202

Summary

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Transcript: ENSMUST00000238198.2 Slc30a10-202

Summary

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