Transcript: ENSMUST00000237080.2 Mcrip2-206

Description

MAPK regulated corepressor interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915491]

Gene Synonyms

9530058B02Rik, Fam195a

Location

Chromosome 17: 26,082,672-26,087,708 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 621 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000025732.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000026828.7	Mcrip2-201	842	160aa	ENSMUSP00000026828.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28535	Q9CQB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000235806.2	Mcrip2-203	738	145aa	ENSMUSP00000158493.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BBG2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000236479.2	Mcrip2-204	547	146aa	ENSMUSP00000157779.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9S0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000237080.2	Mcrip2-206	945	65aa	ENSMUSP00000157703.2	Nonsense mediated decay		A0A494B9L4	-
ENSMUST00000237876.2	Mcrip2-207	775	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000237000.2	Mcrip2-205	407	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000235578.2	Mcrip2-202	659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 945 bps, Translation length: 65 residues

Version

ENSMUST00000237080.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSMUST00000237080.2 Mcrip2-206

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Transcript: ENSMUST00000237080.2 Mcrip2-206

Summary

About Us

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