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- Splice variants
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Gene: Gm45861 ENSMUSG00000110333

Description

predicted gene 45861 [Source:MGI Symbol;Acc:MGI:5804976]

Location

Chromosome 8: 27,937,128-28,110,945 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 2 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000209669.2	Gm45861-201	7184	1923aa	ENSMUSP00000147714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1B0GRY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000210427.2	Gm45861-202	6111	1629aa	ENSMUSP00000147760.2	Nonsense mediated decay		A0A1B0GS20	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Gene: Gm45861 ENSMUSG00000110333

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Gene: Gm45861 ENSMUSG00000110333

Summary

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