Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Or5k16 ENSMUSG00000090629

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Description

olfactory receptor family 5 subfamily K member 16 [Source:MGI Symbol;Acc:MGI:3030014]

Gene Synonyms

GA_x54KRFPKG5P-55134972-55134019, MOR184-11P, MOR184-9, Olfr1563-ps1, Olfr180

Location

Chromosome 16: 58,734,648-58,749,755 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 3 transcripts (splice variants), 96 orthologues and 393 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000171656.3	Or5k16-201	1154	317aa	ENSMUSP00000128358.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28239	F8VQ90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000206168.2	Or5k16-203	1518	307aa	ENSMUSP00000145601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0U1RNK4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000205883.2	Or5k16-202	609	135aa	ENSMUSP00000145802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0U1RP27	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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