Gene: Klf12 ENSMUSG00000072294

Description

Kruppel-like transcription factor 12 [Source:MGI Symbol;Acc:MGI:1333796]

Gene Synonyms

2700063E05Rik, AP-2rep, B130052C06Rik, D530033K05Rik

Location

Chromosome 14: 100,108,068-100,522,115 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues, 22 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000228216.2	Klf12-205	5890	402aa	ENSMUSP00000153901.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36998	O35738	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000097079.5	Klf12-201	1856	402aa	ENSMUSP00000094844.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36998	O35738	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000226774.2	Klf12-204	719	153aa	ENSMUSP00000153987.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BQ01	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000226544.2	Klf12-203	832	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000226205.2	Klf12-202	213	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000228612.2	Klf12-206	1137	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Klf12 ENSMUSG00000072294

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Gene: Klf12 ENSMUSG00000072294

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