Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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  - Gene tree
  - Orthologues
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Gene: Msl2 ENSMUSG00000066415

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Description

MSL complex subunit 2 [Source:MGI Symbol;Acc:MGI:1925103]

Gene Synonyms

E130103E02Rik, Msl2l1, Rnf184

Location

Chromosome 9: 100,956,154-100,981,999 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 2 transcripts (splice variants) and 260 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000085177.5	Msl2-201	4889	577aa	ENSMUSP00000082270.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS85717	Q69ZF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000189616.2	Msl2-202	2612	100aa	ENSMUSP00000139396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A087WNL5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

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Summary

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