Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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- Strains
  - Gene tree
  - Orthologues
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Ontologies
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Genetic Variation
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Gene: Krtap6-3 ENSMUSG00000057855

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Description

keratin associated protein 6-3 [Source:MGI Symbol;Acc:MGI:1330279]

Location

Chromosome 16: 88,880,903-88,881,422 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 2 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000185581.2	Krtap6-3-202	520	57aa	ENSMUSP00000140246.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A087WQL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000079151.2	Krtap6-3-201	444	54aa	ENSMUSP00000078152.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6T6A9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

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Summary

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