Gene: Zc3h12a ENSMUSG00000042677

Description

zinc finger CCCH type containing 12A [Source:MGI Symbol;Acc:MGI:2385891]

Gene Synonyms

Mcpip1

Location

Chromosome 4: 125,012,216-125,021,633 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 2 transcripts (splice variants), 276 orthologues, 6 paralogues and is associated with 39 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000036188.8	Zc3h12a-201	2755	596aa	ENSMUSP00000037172.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18638	Q5D1E7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000131685.2	Zc3h12a-202	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Zc3h12a ENSMUSG00000042677

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Zc3h12a ENSMUSG00000042677

Summary

About Us

Get help

Our sister sites

Follow us