Gene: Cst10 ENSMUSG00000033156

Description

cystatin 10 (chondrocytes) [Source:MGI Symbol;Acc:MGI:1930004]

Gene Synonyms

DD72

Location

Chromosome 2: 149,246,977-149,252,213 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 3 transcripts (splice variants), 257 orthologues, 11 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000047008.9	Cst10-201	804	148aa	ENSMUSP00000043520.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16853	Q9JM84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000109938.8	Cst10-202	729	148aa	ENSMUSP00000105564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16853	Q9JM84	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000109939.3	Cst10-203	606	110aa	ENSMUSP00000105565.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9JM84-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Gene: Cst10 ENSMUSG00000033156

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Gene: Cst10 ENSMUSG00000033156

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