Gene: Pcsk5 ENSMUSG00000024713

Description

proprotein convertase subtilisin/kexin type 5 [Source:MGI Symbol;Acc:MGI:97515]

Gene Synonyms

PC5/6A, PC5A, PC6, SPC6, b2b1549Clo, b2b585Clo

Location

Chromosome 19: 17,409,683-17,814,996 reverse strand.

GRCm39:CM001012.3

About this gene

This gene has 5 transcripts (splice variants), 269 orthologues, 9 paralogues and is associated with 87 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025618.16	Pcsk5-201	7188	1877aa	ENSMUSP00000025618.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50401	Q04592	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000050715.10	Pcsk5-202	5768	915aa	ENSMUSP00000050272.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50402	Q04592-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237115.2	Pcsk5-205	2960	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000235828.2	Pcsk5-204	4062	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235505.2	Pcsk5-203	3334	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Pcsk5 ENSMUSG00000024713

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Gene: Pcsk5 ENSMUSG00000024713

Summary

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