Gene: Ssr1 ENSMUSG00000021427

Description

signal sequence receptor, alpha [Source:MGI Symbol;Acc:MGI:105082]

Gene Synonyms

SSR, TRAPalpha

Location

Chromosome 13: 38,150,581-38,178,193 reverse strand.

GRCm39:CM001006.3

About this gene

This gene has 4 transcripts (splice variants), 236 orthologues and is associated with 55 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000225319.2	Ssr1-204	1610	318aa	ENSMUSP00000152975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000021864.8	Ssr1-201	9333	286aa	ENSMUSP00000021864.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26459	Q9CY50	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225246.2	Ssr1-203	1825	298aa	ENSMUSP00000153120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCT4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000224399.2	Ssr1-202	523	115aa	ENSMUSP00000153346.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YDB7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: Ssr1 ENSMUSG00000021427

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Ssr1 ENSMUSG00000021427

Summary

About Us

Get help

Our sister sites

Follow us