Gene: Pkd1l1 ENSMUSG00000046634

Description

polycystic kidney disease 1 like 1 [Source:MGI Symbol;Acc:MGI:2156538]

Location

Chromosome 11: 8,776,708-8,938,709 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 2 transcripts (splice variants), 131 orthologues, 10 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000154153.9	Pkd1l1-201	8495	2707aa	ENSMUSP00000120803.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0A0MQK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000155886.2	Pkd1l1-202	676	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Paralogues

Sorry, this page is not available for this feature. Please select a valid link from the menu on the left.

If you think this is an error, or you have any questions, please contact our HelpDesk team.

Gene: Pkd1l1 ENSMUSG00000046634

Paralogues

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Pkd1l1 ENSMUSG00000046634

Paralogues

About Us

Get help

Our sister sites

Follow us