Gene: Hvcn1 ENSMUSG00000064267

Description

hydrogen voltage-gated channel 1 [Source:MGI Symbol;Acc:MGI:1921346]

Gene Synonyms

0610039P13Rik, BTS, mVSOP

Location

Chromosome 5: 122,344,867-122,380,360 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues, 5 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000100747.3	Hvcn1-202	2805	269aa	ENSMUSP00000098312.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19644	Q3U2S8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000072602.14	Hvcn1-201	2790	269aa	ENSMUSP00000072401.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19644	Q3U2S8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000143560.8	Hvcn1-203	1010	168aa	ENSMUSP00000118013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3Z019	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000145854.8	Hvcn1-204	657	47aa	ENSMUSP00000118151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YZ46	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000196187.5	Hvcn1-205	427	41aa	ENSMUSP00000143483.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JGA0	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,