Gene: Zbtb4 ENSMUSG00000018750

Description

zinc finger and BTB domain containing 4 [Source:MGI Symbol;Acc:MGI:1922830]

Gene Synonyms

2310026P19Rik, 9230111I22Rik

Location

Chromosome 11: 69,656,738-69,674,849 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 7 transcripts (splice variants), 190 orthologues, 2 paralogues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000108639.8	Zbtb4-202	7811	982aa	ENSMUSP00000104279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36197	Q5F293	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000108640.8	Zbtb4-203	4067	982aa	ENSMUSP00000104280.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36197	Q5F293	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000108638.2	Zbtb4-201	2552	364aa	ENSMUSP00000104278.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14DI5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000108642.8	Zbtb4-204	904	219aa	ENSMUSP00000104282.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QZJ3	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000156932.8	Zbtb4-207	554	136aa	ENSMUSP00000115687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QZJ2	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000132528.8	Zbtb4-205	433	56aa	ENSMUSP00000121694.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5F295	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000153943.2	Zbtb4-206	429	50aa	ENSMUSP00000118027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5F296	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,