Transcript: ENST00000650338.1 PRMT6-203

Description

protein arginine methyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18241]

Gene Synonyms

FLJ10559, HRMT1L6

Location

Chromosome 1: 107,056,902-107,067,636 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 4820 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000198890.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000370078.2	PRMT6-201	2621	375aa	ENSP00000359095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41360	Q96LA8-1	NM_018137.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000650338.1	PRMT6-203	2715	313aa	ENSP00000497826.1	Nonsense mediated decay		A0A3B3ITK4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000649727.1	PRMT6-202	908	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 2,715 bps, Translation length: 313 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000650338.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000650338.1 PRMT6-203

Summary

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Transcript: ENST00000650338.1 PRMT6-203

Summary

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