Transcript: ENST00000641470.1 OR6F1-203

Description

olfactory receptor family 6 subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:15027]

Gene Synonyms

OST731

Location

Chromosome 1: 247,711,436-247,716,646 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 28 domains and features, is associated with 2587 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000169214.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641470.1	OR6F1-203	1762	308aa	ENSP00000493342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31095	A0A126GV68 Q8NGZ6	NM_001005286.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000641444.1	OR6F1-202	1698	308aa	ENSP00000493324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31095	A0A126GV68 Q8NGZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000641223.1	OR6F1-201	1378	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-
ENST00000642054.1	OR6F1-205	1314	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-
ENST00000641750.1	OR6F1-204	1032	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,762 bps, Translation length: 308 residues

MANE

This MANE Select transcript contains ENSP00000493342 and matches to NM_001005286.2 and NP_001005286.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NGZ6

CCDS

This transcript is a member of the Human CCDS set: CCDS31095

Version

ENST00000641470.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641470.1 OR6F1-203

Summary

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Transcript: ENST00000641470.1 OR6F1-203

Summary

About Us

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