Transcript: ENST00000595464.3 C5AR2-201

Description

complement C5a receptor 2 [Source:HGNC Symbol;Acc:HGNC:4527]

Gene Synonyms

C5L2, GPR77

Location

Chromosome 19: 47,332,175-47,347,329 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 27 domains and features, is associated with 7051 variant alleles and maps to 286 oligo probes.

Gene

This transcript is a product of gene ENSG00000134830.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000595464.3	C5AR2-201	6720	337aa	ENSP00000472620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12699	Q9P296	NM_001271749.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000600626.1	C5AR2-202	1287	337aa	ENSP00000471184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12699	Q9P296	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 6,720 bps, Translation length: 337 residues

MANE

This MANE Select transcript contains ENSP00000472620 and matches to NM_001271749.2 and NP_001258678.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P296

CCDS

This transcript is a member of the Human CCDS set: CCDS12699

Transcript Support Level (TSL)

TSL:1

Version

ENST00000595464.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

3' standard supported extension [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000595464.3 C5AR2-201

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Transcript: ENST00000595464.3 C5AR2-201

Summary

About Us

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