Human (GRCh38.p14)
Description

partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]

Gene Synonyms

FANCN, FLJ21816

Location
About this transcript

This transcript has 11 exons, is associated with 26016 variant alleles and maps to 341 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000261584.9PALB2-20140081186aaENSP00000261584.4
 
Protein coding
CCDS32406Q86YC2 NM_024675.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000561514.3PALB2-20248251188aaENSP00000460666.3
 
Protein coding
H3BN63 -GENCODE basicTSL:5
ENST00000697374.1PALB2-2074361891aaENSP00000513284.1
 
Protein coding
CCDS92128H3BN63 -GENCODE basic
ENST00000697379.2PALB2-21241251188aaENSP00000513287.2
 
Protein coding
H3BN63 -GENCODE basic
ENST00000697377.2PALB2-21040581134aaENSP00000513286.2
 
Protein coding
A0A8V8TKZ4 -GENCODE basic
ENST00000697376.1PALB2-2093974776aaENSP00000513285.1
 
Protein coding
A0A8V8TMK8 -GENCODE basic
ENST00000568219.5PALB2-2063963891aaENSP00000454703.2
 
Protein coding
CCDS92128H3BN63 -GENCODE basicTSL:1
ENST00000566069.6PALB2-20438501071aaENSP00000459237.2
 
Protein coding
I3L1Z5 -GENCODE basicTSL:5
ENST00000697383.1PALB2-2161412364aaENSP00000513289.1
 
Protein coding
A0A8V8TLC8 -GENCODE basic
ENST00000697382.1PALB2-2154751749aaENSP00000513288.1
 
Nonsense mediated decay
A0A8V8TMC9 --
ENST00000565038.2PALB2-203163071aaENSP00000459882.2
 
Nonsense mediated decay
I3L2S5 -TSL:3
ENST00000697375.1PALB2-2085177No protein-
 
Protein coding CDS not defined
---
ENST00000697378.1PALB2-2114340No protein-
 
Protein coding CDS not defined
---
ENST00000697381.1PALB2-2142508No protein-
 
Protein coding CDS not defined
---
ENST00000567003.1PALB2-205789No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000697380.1PALB2-2133017No protein-
 
Retained intron
---
ENST00000697384.1PALB2-2172864No protein-
 
Retained intron
---
Statistics

Exons: 11, Coding exons: 4, Transcript length: 1,630 bps, Translation length: 71 residues

Transcript Support Level (TSL)

TSL:3

Version

ENST00000565038.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.