Human (GRCh38.p14)
Description

atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]

Gene Synonyms

AD-FSP, FSP1, SPG3, SPG3A

Location
About this transcript

This transcript has 14 exons, is annotated with 17 domains and features, is associated with 29470 variant alleles and maps to 455 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000358385.12ATL1-2012504558aaENSP00000351155.7
 
Protein coding
CCDS9700Q8WXF7-1 NM_015915.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000556478.3ATL1-2093844553aaENSP00000501428.2
 
Protein coding
CCDS32077Q8WXF7-2 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000553509.2ATL1-2033778553aaENSP00000450989.2
 
Protein coding
CCDS32077Q8WXF7-2 -GENCODE basicAPPRIS ALT1TSL:4
ENST00000441560.6ATL1-2022853553aaENSP00000413675.2
 
Protein coding
CCDS32077Q8WXF7-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000682037.1ATL1-2142356619aaENSP00000508289.1
 
Protein coding
A0A804HLC1 -GENCODE basic
ENST00000555960.5ATL1-20762099aaENSP00000452506.1
 
Protein coding
G3V5T4 -TSL:5CDS 3' incomplete
ENST00000557735.1ATL1-21057047aaENSP00000451015.1
 
Protein coding
G3V334 -TSL:4CDS 3' incomplete
ENST00000554886.1ATL1-20554575aaENSP00000452074.1
 
Protein coding
G3V4Y8 -TSL:4CDS 3' incomplete
ENST00000674503.1ATL1-21342811aaENSP00000501520.1
 
Protein coding
A0A6I8PRS8 -CDS 3' incomplete
ENST00000674288.1ATL1-2115298154aaENSP00000501522.1
 
Nonsense mediated decay
A0A6I8PUC8 --
ENST00000556067.1ATL1-208550105aaENSP00000451100.1
 
Nonsense mediated decay
H0YJA7 -TSL:4CDS 5' incomplete
ENST00000555266.1ATL1-20638352aaENSP00000450897.1
 
Nonsense mediated decay
H0YJ65 -TSL:3CDS 5' incomplete
ENST00000674478.1ATL1-2121565No protein-
 
Protein coding CDS not defined
---
ENST00000553746.2ATL1-2043652No protein-
 
Retained intron
--TSL:2
ENST00000682219.1ATL1-2153321No protein-
 
Retained intron
---
ENST00000682487.1ATL1-2173293No protein-
 
Retained intron
---
ENST00000683837.1ATL1-2223198No protein-
 
Retained intron
---
ENST00000683330.1ATL1-2202976No protein-
 
Retained intron
---
ENST00000683703.1ATL1-2212538No protein-
 
Retained intron
---
ENST00000682226.1ATL1-2161974No protein-
 
Retained intron
---
ENST00000683037.1ATL1-2181900No protein-
 
Retained intron
---
ENST00000684737.1ATL1-2231894No protein-
 
Retained intron
---
ENST00000683315.1ATL1-219737No protein-
 
Retained intron
---
Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,778 bps, Translation length: 553 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WXF7

CCDS

This transcript is a member of the Human CCDS set: CCDS32077

Transcript Support Level (TSL)

TSL:4

Version

ENST00000553509.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.