Human (GRCh38.p14)
Description

basic helix-loop-helix ARNT like 1 [Source:HGNC Symbol;Acc:HGNC:701]

Gene Synonyms

ARNTL, ARNTL1, BHLHE5, JAP3, MOP3, PASD3

Location
About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 5714 variant alleles and maps to 342 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000403290.6BMAL1-2032787626aaENSP00000384517.1
 
Protein coding
CCDS73259O00327-2 NM_001297719.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000673817.1BMAL1-2232854630aaENSP00000501212.1
 
Protein coding
CCDS91444A0A669KBF4 -GENCODE basicAPPRIS ALT1
ENST00000401424.6BMAL1-2022807582aaENSP00000385915.2
 
Protein coding
CCDS44543O00327-9 -GENCODE basicTSL:1
ENST00000389707.8BMAL1-2012776625aaENSP00000374357.4
 
Protein coding
O00327-8 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000403510.8BMAL1-2052728626aaENSP00000385581.4
 
Protein coding
CCDS73259O00327-2 -GENCODE basicAPPRIS P4TSL:2
ENST00000529388.6BMAL1-2142641626aaENSP00000433571.2
 
Protein coding
CCDS73259O00327-2 -APPRIS P4TSL:4
ENST00000403482.7BMAL1-2042389624aaENSP00000385897.3
 
Protein coding
O00327-7 -GENCODE basicTSL:1
ENST00000534544.5BMAL1-22180759aaENSP00000431566.1
 
Protein coding
E9PKN1 -TSL:5CDS 3' incomplete
ENST00000529050.5BMAL1-21357123aaENSP00000434044.1
 
Protein coding
E9PSD2 -TSL:4CDS 3' incomplete
ENST00000533520.5BMAL1-219567100aaENSP00000431488.1
 
Protein coding
E9PL54 -TSL:4CDS 3' incomplete
ENST00000527998.5BMAL1-21251976aaENSP00000433540.1
 
Protein coding
E9PKG7 -TSL:5CDS 3' incomplete
ENST00000531665.5BMAL1-21839060aaENSP00000434781.2
 
Protein coding
E9PNI4 -TSL:5CDS 3' incomplete
ENST00000674108.1BMAL1-228278866aaENSP00000501035.1
 
Nonsense mediated decay
A0A669KB07 --
ENST00000673834.1BMAL1-224278686aaENSP00000500983.1
 
Nonsense mediated decay
A0A669KAX2 --
ENST00000673888.1BMAL1-226276663aaENSP00000501059.1
 
Nonsense mediated decay
E9PRB1 --
ENST00000673626.1BMAL1-222275963aaENSP00000500988.1
 
Nonsense mediated decay
E9PRB1 --
ENST00000673892.1BMAL1-227274563aaENSP00000501106.1
 
Nonsense mediated decay
E9PRB1 --
ENST00000673868.1BMAL1-225197650aaENSP00000500968.1
 
Nonsense mediated decay
A0A669KAV4 -CDS 5' incomplete
ENST00000524392.5BMAL1-2111421171aaENSP00000436442.1
 
Nonsense mediated decay
H0YER9 -TSL:3CDS 5' incomplete
ENST00000530357.6BMAL1-21786863aaENSP00000436313.2
 
Nonsense mediated decay
E9PRB1 -TSL:5
ENST00000482049.6BMAL1-20873970aaENSP00000436721.2
 
Nonsense mediated decay
E9PI92 -TSL:3
ENST00000529825.6BMAL1-21655163aaENSP00000434263.2
 
Nonsense mediated decay
E9PRB1 -TSL:4
ENST00000497429.5BMAL1-210764No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000472842.1BMAL1-2063862No protein-
 
Retained intron
--TSL:2
ENST00000480685.5BMAL1-207633No protein-
 
Retained intron
--TSL:3
ENST00000529390.1BMAL1-215591No protein-
 
Retained intron
--TSL:4
ENST00000485918.2BMAL1-209457No protein-
 
Retained intron
--TSL:3
ENST00000534102.1BMAL1-220418No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 7, Coding exons: 4, Transcript length: 1,421 bps, Translation length: 171 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 5' incomplete

Version

ENST00000524392.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.