Human (GRCh38.p14)
Description

treacle ribosome biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:11654]

Gene Synonyms

TCS, TREACLE

About this transcript

This transcript has 27 exons, is annotated with 58 domains and features, is associated with 19979 variant alleles and maps to 865 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000643257.2TCOF1-21650261489aaENSP00000493815.1
 
Protein coding
CCDS93805Q13428-3 NM_001371623.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3
ENST00000377797.7TCOF1-20250951488aaENSP00000367028.4
 
Protein coding
CCDS54936Q13428-1 -GENCODE basicTSL:5
ENST00000323668.11TCOF1-20148321411aaENSP00000325223.6
 
Protein coding
CCDS4306Q13428-2 -GENCODE basicTSL:1
ENST00000445265.6TCOF1-20648251412aaENSP00000409944.2
 
Protein coding
CCDS47306Q13428-8 -GENCODE basicTSL:5
ENST00000427724.7TCOF1-20448001450aaENSP00000390717.3
 
Protein coding
CCDS43388Q13428-6 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000513346.5TCOF1-21146461488aaENSP00000427484.1
 
Protein coding
E7ETY2 -GENCODE basicTSL:5
ENST00000439160.6TCOF1-20546441451aaENSP00000406888.2
 
Protein coding
CCDS47305Q13428-7 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000504761.6TCOF1-20744671488aaENSP00000421655.2
 
Protein coding
CCDS54936Q13428-1 -GENCODE basicTSL:1
ENST00000650162.1TCOF1-21941941358aaENSP00000497075.1
 
Protein coding
A0A3B3IS06 -CDS 3' incomplete
ENST00000674413.1TCOF1-22037261240aaENSP00000501343.1
 
Protein coding
A0A6I8PRA0 -CDS 5' incomplete
ENST00000513538.2TCOF1-2123526994aaENSP00000422567.2
 
Protein coding
H0Y8Y7 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000394269.7TCOF1-2033400958aaENSP00000377811.3
 
Protein coding
CCDS47307Q13428-5 -GENCODE basicTSL:1
ENST00000646961.1TCOF1-218935297aaENSP00000496754.1
 
Protein coding
A0A2R8Y857 -CDS 3' incomplete
ENST00000515516.1TCOF1-215661188aaENSP00000426471.1
 
Protein coding
H0YA99 -TSL:5CDS 5' incomplete
ENST00000643812.1TCOF1-217974108aaENSP00000493833.1
 
Nonsense mediated decay
A0A2R8Y4M7 -CDS 5' incomplete
ENST00000506767.1TCOF1-210869148aaENSP00000426587.1
 
Nonsense mediated decay
H0YAB7 -TSL:5CDS 5' incomplete
ENST00000506063.1TCOF1-208526No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000515035.5TCOF1-2145240No protein-
 
Retained intron
--TSL:2
ENST00000514442.5TCOF1-2135195No protein-
 
Retained intron
--TSL:2
ENST00000506630.1TCOF1-209897No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 27, Coding exons: 26, Transcript length: 4,646 bps, Translation length: 1,488 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000513346.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.